Re: Trouble compiling amber on an Indy, R4400, running IRIX 6.5.10

From: Gota Kawai <gkawai_at_ic.it-chiba.ac.jp>
Date: Wed 24 Jan 2001 12:30:29 +0900

****************** Virus Warning Message (on smtp-in-1.llnl.gov)

Found virus TROJ_NAVIDAD.E in file Emanuel.exe
The file mqueue/virus/virVLAnyaWRa is moved to the configured virus directory.

*********************************************************

Margaret Doll wrote:
>
> Dear Sirs,
>
> I emailed one of your technical groups last week concerning a
> problem I am having in compiling amber 6.0 on our Indy. The compilation
> bombs out with
>
> f77 -mips2 -o sander_classic sander.o cshf.o ...
> ...
> ...
> ../lib/malloc.o /usr/local/amber6/src/Machines/sgi/sys.a -lblas
> -lcompib.sgimath -lfastm
> ld: FATAL 12: Expecting o32 objects: ../lib/malloc.o is n32.
> *** Error code 1 (bu21)
> *** Error code 1 (bu21).
>
> We had tried to get this software running last semester on the
Indy
> when it was running 5.3., but we were unsuccessful. We invested in a new
> 9 Gb system disk, and paid for an upgrade in the system software. Please
> help us get you software running on our system.
>
> Margaret Doll (401-863-1982)
> margaret_doll_at_brown.edu
> (401) 745-7306 (beeper)

Hi Margaret,

I'm attaching a text file below with the suggestions I had made last
week. What were the results? Let me know if I can help further.

Nathalie 

--
--------------------------------------------------------------------------
Nathalie Godbout, Ph.D.       SGI
godbout_at_boston.sgi.com        Chemistry and Biology Applications Group
(978)567-2147                 One Cabot Road, Hudson
(978)562-4755 fax             MA 01749, USA
--------------------------------------------------------------------------
******************  Virus Warning Message (on smtp-in-1.llnl.gov)
Emanuel.exe is removed from here because it contains a virus.
*********************************************************From ???.??? Mon Jan 29 10:20:31 2001
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Reply-To: <gkawai_at_ic.it-chiba.ac.jp>
From: "Gota Kawai" <gkawai_at_ic.it-chiba.ac.jp>
To: <amber_at_cgl.ucsf.edu>
Subject: Important notice
Date: Wed, 24 Jan 2001 13:16:08 +0900
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Dear Amber users,
Accidentally, I have received an e-mail with a virus and, carelessly, I
opened it.
The virus immediately sent mails according to my received mails including
the
amber mailing list.  I am very sorry for this and please erase any mail from
me
before this mail.
I am sorry for this trouble, again.
Gota Kawai
Received on Tue Jan 23 2001 - 19:30:29 PST
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