Re: Too many atoms

From: Bill Ross <ross_at_cgl.ucsf.edu>
Date: Sat 23 Sep 2000 12:55:06 -0700 (PDT)

        I am trying to build an input deck for a dynamics simulation. Everything
        seems to go well up to parm. When I try to run parm (AMBER5.0), I find
        that I get the following error message :
        
        Missing mass parameter: Atom number 759 type
        
You can get the v6 leap free from ftp://odin.compchem.ucsf.edu/pub/a6.tar.gz
(includes leap & carnal only).

It may not solve your problem if you have omitted something,
but if so, any error msg it gives is likely to be more
informative, and it's easy to use:

% tleap
> x = loadpdb some.pdb
> saveamberparm x x.top x.crd
> quit
%

Bill Ross
        
Received on Sat Sep 23 2000 - 12:55:06 PDT
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