Periodic Boundary Condition

From: Kouji Hayama <>
Date: Mon 31 Jul 2000 14:11:53 +0900

Dear Amber users.
I am using the Amber 6 on Linux.
I want to run the Periodic Boundary Simulation.
So, I did ....

1. I made the system protain and waters(box) by using xleap.
2. I run the minimization.
3. I run the MD with NTB=1(constant volume).

But the system expanded.
Would you tell me how to run MD with Periodic Boundary Condition.
Thank you.
Received on Sun Jul 30 2000 - 22:11:53 PDT
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