As the message states, "nrun" is no longer a variable in sander.
If you really want the capability use sander_classic. Otherwise
anything you might want to do in the way of simulated annealing
can either be done with the nmr options or by scripting your
sander run through the Interface program.
jim
On Sun, 12 Mar 2000, David Bevan wrote:
> I am trying to run Amber6 on an SGI R10000 under IRIX 6.5. If I include the
> nrun parameter in the input file for sander, I get the following error
> message:
>
> namelist read (nrun): variable not in namelist
>
> Can anybody tell me why this happens?
>
>
> David Bevan
>
> David R. Bevan
> Dept. of Biochemistry
> 201 Fralin Biotechnology Center
> Virginia Tech
> Blacksburg, VA 24061
>
> Phone: (540) 231-5040
> FAX: (540) 231-9070
>
>
>
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James W. Caldwell (voice) 415-476-8603
Department of Pharmaceutical Chemistry (fax) 415-502-1411
Mail Stop 0446 (email) caldwell_at_heimdal.ucsf.edu
513 Parnassus Avenue
University of California
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Received on Sun Mar 12 2000 - 16:47:19 PST
