I am sure many people have come up with different ways to view the
output from a dynamic run. What is your way? Anyone care to respond
with some advice?
See 'programs.graphics' under
http://amber.ch.ic.ac.uk
and note that Terry Lybrand's group's MD Display (for SGI)
is included on the OM CD.
With dynamics, I
can see that the copious output possible complicates converting pdb from
one format to another.
(Carnal can convert an mdcrd into lots of pdb files by the way.)
I normally use ChemX from Oxford Molecular to
view and manipulate structures. Can I use Xleap to view a stream of
coordinate sets like a movie?
No. See MD Display or the other programs above.
Bill Ross
Received on Thu Apr 29 1999 - 14:13:05 PDT
